1、发表论文：
1) Huixia Jia, Guangjian Liu, Jianbo Li, Jin Zhang, Pei Sun, Zhao Shutang, Zhou Xun, Lu Mengzhu, Hu Jianjun. Genome resequencing reveals demographic history and genetic architecture of seed salinity tolerance in Populus euphratica. Journal of Experimental Botany, 2020, 71(14): 4308–4320.
2) Jin Zhang, Xueqin Song, Lei Zhang, Huixia Jia, Xiaopeng Peng, Zicheng Zhao, Xuehui Su, Xilin Li, Mengzhu Lu, Jianjun Hu. Agronomic performance of 27 Populus clones evaluated after two 3-year coppice rotations in Henan, China. GCB Bioenergy. 2020, 12: 168–181.
3) Lei Zhang, Bobin Liu, Jin Zhang, Jianjun Hu. Insights of molecular mechanism of xylem development in five black poplar cultivars. Frontiers in Plant Science. 2020, 11:620.
4) Pei Sun, Huixia Jia, Xingqi Cheng, et al. Genetic architecture of leaf morphological and physiological traits in a P. deltoides ‘Danhong’ × P. simonii ‘Tongliao1’ pedigree revealed by quantitative trait locus analysis. Tree Genetics & Genomes, 2020,16(3):45.
5) Pei Sun, Huixia Jia, Zhiqiang Yue, et al. Genetic identification of 91 poplar cultivars based on SSR markers. Nordic Journal of Botany, 2020,38(6):12.
6) Huixia Jia, Lijuan Wang, Jianbo Li, Pei Sun, Mengzhu Lu, Jianjun Hu. Comparative metabolomics analysis reveals different metabolic responses to drought in tolerant and susceptible poplar species. Physiologia Plantarum, 2020, 168: 531–546.
7) Huixia Jia, Lijuan Wang, Jianbo Li, Pei Sun, Mengzhu Lu, Jianjun Hu. Physiological and metabolic responses of Salix sinopurpurea and Salix suchowensis to drought stress. Trees-structure and function, 2020, 34:563–577.
8) Jin Zhang, Feng Gao, Huixia Jia, Jianjun Hu, Zhaozhong Feng. Molecular response of poplar to single and combined ozone and drought. Science of the Total Environment, 2019, 655: 1364-1375.
9) Sun Pei, Jia Huixia, Zhang Yahong, Li Jianbo, Lu Mengzhu, Hu Jianjun. Deciphering genetic architecture of adventitious root and related shoot traits in Populus using QTL mapping and RNA-seq data. International Journal of Molecular Sciences, 2019, 20, 6114.
10) Huixia Jia, Jianbo Li, Jin Zhang, Pei Sun, Mengzhu Lu, Jianjun Hu. The Salix psammophila SpRLCK1 involved in drought and salt tolerance. Plant Physiology and Biochemistry, 2019, 144: 222-233.
11) Huixia Jia, Jin Zhang, Jianbo Li, Pei Sun, Yahong Zhang, Xuebing Xin, Mengzhu Lu, Jianjun Hu. Genome-wide transcriptomic analysis of a desert willow, Salix psammophila, reveals the function of hub genes SpMDP1 and SpWRKY33 in drought tolerance. BMC Plant Biology, 2019, 19: 356.
12) Jin Zhang, Tianyi Zhan, Huixia Jia, Lishuan Wu, Mengzhu Lu, Jianjun Hu. Whole-genome re-sequencing reveals molecular mechanisms of biomass changes in 11-year-old Bt transgenic poplar. Trees-structure and Function, 2018, 32:1609–1620.
13) Liuqiang Wang, Xiaoling Zhang, Jin Zhang, Wei Fan, Mengzhu Lu, Jianjun Hu. Proteomic analysis and identification of possible allergenic proteins in mature pollen of Populus tomentosa. International Journal of Molecular Sciences. 2018, 19(1): 250.
14) Jianbo Li, Huixia Jia, Jin Zhang, Jingshuang Sun, Yongan Zhang, Mengzhu Lu, Xuebing Xin, Jianjun Hu. Genome-wide characterization of protein phosphatase 2C genes in Populus euphratica and their expression profiling under multiple abiotic stresses. Tree Genetics & Genomes, 2018, 14: 80.
15) Jianbo Li, Jin Zhang, Huixia Jia, Zhiqiang Yue, Mengzhu Lu, Xuebing Xin, Jianjun Hu. Genome-wide characterization of the sHsp gene family in Salix suchowensis reveals its functions under different abiotic stresses. International Journal of Molecular Sciences, 2018, 19, 3246.
16) Jianjun Hu, Jin Zhang, Xingling Chen, Jinhui Lv, Huixia Jia, Shutang Zhao, Mengzhu Lu. An Empirical Assessment of Transgene Flow from a Bt Transgenic Poplar Plantation. PLOS one, 2017, 12(1): e0170201.
17) Fengxia Tian, Ermei Chang, Yu Li, Pei Sun, Jianjun Hu, Jin Zhang. Expression and integrated network analyses revealed functional divergence of NHX-type Na+/H+ exchanger genes in poplar. Scientific Reports, 2017, 7: 2607.
18) Huixia Jia, Haifeng Yang, Pei Sun, Jianbo Li, Yinghua Guo, Xiaojiao Han,Guosheng Zhang, Mengzhu Lu, Jianjun Hu.De novo transcriptome assembly,development of EST-SSR markers and population genetic analyses for the desert biomass willow,Salix psammophila.Scientific Reports,2016,6, 39591.
19) Jin Zhang, Huixia Jia, Jianbo Li, Yu Li, Mengzhu Lu, Jianjun Hu.Molecular evolution and expression divergence of the Populus euphratica Hsf genes provide insight into the stress acclimation of desert poplar. Scientific Reports, 2016,6, 30050.
20) Jianbo Li, Huixia Jia, Xiaojiao Han, Jin Zhang, Pei Sun, Mengzhu Lu, Jianjun Hu.Selection of Reliable Reference Genes for Gene Expression Analysis under Abiotic Stresses in the Desert Biomass Willow, Salix psammophila. Frontiers in Plant Science,2016,7:1505.
21) Xiaoling Zhang, Jin Zhang, Yinghua Guo, Pei Sun, Huixia Jia, Wei Fan, Mengzhu Lu, Jianjun Hu. Comparative proteomic analysis of mature pollen in triploid and diploid Populus deltoids. International journal of molecular sciences, 2016,17(9):1475.
22) Huixia Jia, Jianbo Li, Jin Zhang, Yiqiu Ren, Jianjun Hu, Mengzhu Lu.Genome-wide survey and expression analysis of the stress associated protein gene family in desert poplar, Populus euphratica. Tree Genetics Genomes, 2016,12:78.
23) Xixi Song, Jie Fang, Xiaojiao Han, Xuelian He, Mingying Liu, Jianjun Hu, Renying Zhuo. Overexpression of quinone reductase from Salix matsudana Koidz enhances salt tolerance in transgenic Arabidopsis thaliana. Gene,2016,576:520-527.
24) Enzhu Hu, Feng Gao, Yue Xin, Huixia Jia, Kaihui Li, Jianjun Hu, Zhaozhong Feng. Concentration- and flux-based ozone dose-response relationships for five poplar clones grown in North China. Environmental Pollution, 2015,207: 21-30.
25) Jin Zhang, Lishuan Wu, Wei Fan, Xiaoling Zhang, Huixia Jia, Yu Li, Yafang Yin, Jianjun Hu, Mengzhu Lu. Proteomic analysis and candidate allergenic proteins in Populus deltoides CL. “2KEN8” mature pollen. Frontiers in Plant Science, 2015,6: 548.
26) Jin Zhang, Yu Li, Huixia Jia, Jianbo Li, Juan Huang, Mengzhu Lu, Jianjun Hu. The heat shock factor gene family in Salix suchowensis: a genome-wide survey and expression profiling during development and abiotic stresses. Frontiers in Plant Science, 2015,6: 748.
27) Fengxia Tian, Tan Wang, Yuli Xie, Jin Zhang, Jianjun Hu. Genome-wide identification, classification, and expression analysis of 14-3-3 gene family in Populus. PLoS ONE, 2015, 10(4): e0123225.
28) Fengxia Tian, Jianlei Zang, Tan Wang, Yuli Xie, Jin Zhang, Jianjun Hu.Aldehyde dehydrogenase gene superfamily in Populus: organization and expression divergence between paralogous gene pairs. PLoS ONE, 2015,10(4): e0124669.
29)张磊, 胡建军. 转 BtCry1Ac 欧洲黑杨的外源基因插入位点分析及特异性检测. 林业科学, 2020, 56(10): 5-.
30)张磊, 曹德美, 胡建军. 植物叶色形成调控机制研究进展. .植物遗传资源学报,2020.
31)张亚红,贾会霞,王志彬,孙 佩,曹德美,胡建军. 滇杨种群遗传多样性与遗传结构. 生物多样性,2019, 27(4):355-365.
32)成星奇，贾会霞，孙佩，张亚红，胡建军.丹红杨×通辽1号杨杂交子代叶形性状的遗传变异分析. 林业科学研究,2019,32(2):100-110.
33)孙佩，姬慧娟，张亚红，贾会霞，胡建军. 丹红杨×通辽1号杨杂交子代苗期抗旱性初步评价. 植物遗传资源学报, 2019,20(2):297-308.
34)章小铃, 王留强, 孙佩, 吴立栓, 樊玮, 张进, 卢孟柱, 胡建军. 杨树不同种质花粉萌发和致敏蛋白差异分析. 林业科学，2017, 53(2):54-64.
35)任逸秋, 贾会霞, 郭英华, 徐向东, 李建波, 卢孟柱, 樊军峰, 胡建军. 胡杨F-box基因克隆和功能分析. 分子植物育种, 2017, 15(5): 1655-1662.
36)贾会霞, 李建波, 孙佩, 李开花, 胡建军, 卢孟柱. 胡杨CBF基因家族的鉴定及表达特性分析. 分子植物育种, 2017, 15(2): 492-500.
37)贾会霞, 孙佩, 李建波, 李喜林, 苏雪辉, 赵自成, 卢孟柱, 胡建军. 丹红杨×转BtCry1Ac 欧洲黑杨杂交子代抗虫性及生长量测定. 分子植物育种, 2017, 15.
38) 李开花, 胡建军. 杨树良种‘创新杨’.林业科学，2016，52（3）：130-130.
39) 曹国玉, 李继祥,买买提库尔班·阿力, 李开花, 胡建军. 杨树良种‘北杨’. 林业科学, 2016，52(9): 156-156.
40) 姬慧娟, 贾会霞, 章小铃, 胡建军. 2016. 干旱胁迫对红皮柳光合特性日变化及生长的影响. 南京林业大学学报(自然科学版), 40(6):41-46
41) 苏雪辉，李喜林，薛毅，赵自成，胡建军，于自力. 2016. 杨树致敏因素——花粉与飞絮量的研究. 林业科技通讯, 2:6-10.
42) 贾会霞, 吴立栓, 胡建军, 卢孟柱. 2015.杨树新品种的SSR指纹图谱构建和倍性检测. 林业科学, 51(2): 69-79.
43) 吴立栓, 胡建军, 苏雪辉, 李喜林, 赵自成. 2014. 黑杨树冠雌花分布与少絮无性系的选择. 林业科学研究, 27( 6): 769-775.
44) 胡建军, 赵自成, 苏雪辉, 李喜林, 卢孟柱. 2014. 杨树新品种‘中豫1 号’. 林业科学, 50(7): 170.
45) 胡建军, 赵自成, 苏雪辉, 李喜林, 卢孟柱. 2014. 杨树新品种‘中成1 号’. 林业科学, 50(5): 159.
46) 胡建军, 卢孟柱, 赵自成 等. 2013. 杨树良种‘南杨’林业科学, 49(7): 188.
47)贾会霞, 吴立栓, 胡建军, 卢孟柱. 2013. 柳属种质资源遗传多样性和亲缘关系的AFLP分析. 林业科学, 37(6): 37-44.
48)贾会霞, 胡建军, 卢孟柱. 2013. 基于CE-AFLP的5个美洲黑杨新品种指纹图谱分析. 林业科学研究, 26(6): 281-286.
49) 吕金辉, 胡建军, 卢孟柱. 2012. 基于毛细管电泳的柳树AFLP分子标记研究. 2012. 北京林业大学学报, 34(1)：51-57.
50) 胡建军, 杨敏生, 卢孟柱. 2010. 我国抗虫转基因杨树生态安全性研究进展. 2010. 生物多样性, 18(4): 336-345.
2、出版专(编)著
1) Hu Jianjun, Wang Lijuan, Yan Donghui, Lu Mengzhu. 2014. Research and Application of Transgenic Poplar in China. In: Fenning Trevored. Challenges and Opportunities for the World's Forests in the 21st Century: Springer Netherlands, 567-584.
2) Dietrich Ewald, Hu Jianjun, Yang Minsheng. 2006. Transgenic Forest Trees in China. Tree Transgenesis-Recent Developments. Fladung, Matthias; Ewald, Dietrich (Eds.) Spring.
3) Wang Lida, Han Yifan, Hu Jianjun. 2004. Transgenic Forest Trees for Insect Resistance. Molecular Genetics and Breeding of Forest Trees, Sandeep Kumar, Matthias Fladung, Food Products Press.
4) 郑均宝, 胡建军, 田颖川. 2006. 转基因林木产业化现状及前景. 中国生物技术产业发展报告2005.
5) 韩一凡, 胡建军, 赵自成. 2010. 抗虫杨. 科学普及出版社. 北京.
6) 尹伟伦, 胡建军. 2005. 杨树遗传图谱构建与数量性状基因定位. 中国环境科学出版社, 北京.